PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.2G451100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 343aa    MW: 38290.4 Da    PI: 9.7743
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.2G451100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1315.4e-105897544
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44
                        k  rr+++NReAAr+sR+RKka++++Le    +L +  ++
  Sevir.2G451100.1.p 58 KTLRRLAQNREAARKSRLRKKAYVQQLESSKLKLAQLEQE 97
                        7889************************855444444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-754117IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.39356100IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.51E-758101No hitNo description
PfamPF001705.7E-75899IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-759103No hitNo description
PROSITE patternPS0003606176IPR004827Basic-leucine zipper domain
PfamPF141448.8E-34140215IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MADASSRTDT STVLDDNDKN QRIRSTKHLQ MENGQIMAAA PSNSSDRSDR SDKPLDQKTL  60
RRLAQNREAA RKSRLRKKAY VQQLESSKLK LAQLEQELQK ARQQGIFISS SGDQTHAMSG  120
NGALTFDIEY TRWLEEQNKQ INELRTAVNA HASDSDLRLI VDGIMAHYDE IFKVKGVAAK  180
ADVFHILSGM WKTPAERCFL WLGGFRPSEL LKLLANHLEP LTEQQLLGLT NLQQSSQQAE  240
DALSQGMEAL QQSLAETLAG SLGPSGSSGN VANYMGQMAM AMGKLGTLEN FLRQADNLRQ  300
QTLHQMQRIL TIRQASRALL AIHDYFSRLR ALSSLWLARP RE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0615860.0BT061586.1 Zea mays full-length cDNA clone ZM_BFb0161M21 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004958748.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X1
RefseqXP_012699555.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X1
RefseqXP_012699556.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLC0HGY00.0C0HGY0_MAIZE; Uncharacterized protein
TrEMBLK4JBS20.0K4JBS2_MAIZE; BZIP-type transcription factor (Fragment)
STRINGGRMZM2G361847_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-146TGACG motif-binding factor 6